BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F01SP1|AL427924
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1286 1842 0.0
>3x_Contig1286
Length = 5608
Score = 1842 bits (922), Expect = 0.0
Identities = 943/956 (98%), Gaps = 1/956 (0%)
Strand = Plus / Minus
Query: 1 ttcaaggatcaaaagacttattaccaccttctttagaagwcaccacaacatcatcaacgg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4576 ttcaaggatcaaaagacttattaccaccttctttagaagacaccacaacatcatcaacgg 4517
Query: 61 ctttctttttgaatgttatggaagtcgagtttttgcctcaacttaaccagacaatgaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4516 ctttctttttgaatgttatggaagtcgagtttttgcctcaacttaaccagacaatgaact 4457
Query: 121 ttttatatgaatctcaagttgaatctaatagtccttttgcagtcgaaacattgttcaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 ttttatatgaatctcaagttgaatctaatagtccttttgcagtcgaaacattgttcaacg 4397
Query: 181 gtacacctatattcaaaagtgcaatcgattttaaaatgttatactttaaacttttacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4396 gtacacctatattcaaaagtgcaatcgattttaaaatgttatactttaaacttttacaaa 4337
Query: 241 ccacgaatgcaggaaacttttatagaagaaacgtcgctcacatgttggtttccattgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 ccacgaatgcaggaaacttttatagaagaaacgtcgctcacatgttggtttccattgctg 4277
Query: 301 ataagttttacagttattattacagtatttaccagtcgatttgtggaacacaaaacacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4276 ataagttttacagttattattacagtatttaccagtcgatttgtggaacacaaaacacgg 4217
Query: 361 ttgtcagtaaaaaactcgtttcgtcatggttaactgataaagcatccggagacattacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4216 ttgtcagtaaaaaactcgtttcgtcatggttaactgataaagcatccggagacattacta 4157
Query: 421 gcaaaatattcgccaatgatgacgaatttatagatgccgaaactctgcggttactaaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4156 gcaaaatattcgccaatgatgacgaatttatagatgccgaaactctgcggttactaaacc 4097
Query: 481 agtgtcctagggtatttcaggaaaggcgctctttggaaaaaacggatcactttagtgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4096 agtgtcctagggtatttcaggaaaggcgctctttggaaaaaacggatcactttagtgact 4037
Query: 541 ctacaatagataccttagtgtattttgccactactcttgaatggrtctcatcgtggttac 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4036 ctacaatagataccttagtgtattttgccactactcttgaatggatctcatcgtggttac 3977
Query: 601 ctggtattaaaaaagaagtwaaagatactgamaawgtatcagaatcatcggacaagcgga 660
||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 3976 ctggtattaaaaaagaagttaaagatactgacaatgtatcagaatcatcggacaagcgga 3917
Query: 661 agcaagctaataatgcagaattacgtagtawgtrgtcgtttttcgaagtctcagaagcgg 720
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 3916 agcaagctaataatgcagaattacgtagtatgtggtcgtttttcgaagtctcagaagcgg 3857
Query: 721 atcttactgataaaggtggtacaamgaratwtttattggcagctgataacctagaggaat 780
|||||||||||||||||||||||| || || |||||||||||||||||||||||||||||
Sbjct: 3856 atcttactgataaaggtggtacaacgagatttttattggcagctgataacctagaggaat 3797
Query: 781 ttgaagctgtcacacaaaaattcaccaatttgcattatttactactacaaagtgtcagat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3796 ttgaagctgtcacacaaaaattcaccaatttgcattatttactactacaaagtgtcagat 3737
Query: 841 acgatgtacgtgttcgctgcttgtattacatcaactgcatgttgcactcatcaaggtgg- 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3736 acgatgtacgtgttcgctgcttgtattacatcaactgcatgttgcactcatcaaggtgga 3677
Query: 900 accctgaagttacatccatcgaattggacgagatwatcagttcattagtttcagac 955
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3676 accctgaagttacatccatcgaattggacgagaatatcagttcattagtttcagac 3621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6355
Number of Sequences: 1807
Number of extensions: 6355
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)